Sequence Conservation within QuartOPs for Case #8
| "#QuartOPs" column
represents the number of QuartOPs detected with corresponding E-value cut-off ("Cut-Off" column).
"Avg. %Seq Id" column shows the percent of identical sites in a QuartOP alignment (standard
deviation is given in parentheses). "Avg. % Pairwise Seq Id" column shows the percent of identical sites between pairs of sequences along a QuartOP alignment (standard
deviation is given in parentheses; positions with gaps were excluded from calculations). |
| Cut-Off |
#QuartOPs |
Avg % Id |
Avg. % Pairwise Id |
| 10-2 |
235 |
18.59 (9.89) |
40.53 (10.54) |
| 10-4 |
222 |
18.99 (9.74) |
40.92 (10.39) |
| 10-8 |
200 |
19.82 (9.69) |
41.83 (10.26) |
| 10-20 |
144 |
21.95 (9.32) |
43.84 (9.70) |
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